PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe2G040100.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family bHLH
Protein Properties Length: 253aa    MW: 28964.7 Da    PI: 9.5538
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe2G040100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH406.9e-1377129155
                        CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
                HLH   1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                        ++ +hn+ Er RR+++N+ +++Lr+llP  +   ++kKls      +A  YI +Lq
  Aqcoe2G040100.1.p  77 KKLNHNASERDRRKKLNDLYSTLRSLLPRsD---QKKKLSIPCSISQALIYIPQLQ 129
                        6789*************************66...9999****************99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474593.01E-1673144IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088813.89776128IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.2E-1077129IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.79E-977133No hitNo description
Gene3DG3DSA:4.10.280.101.2E-1277146IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003535.9E-782134IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010106Biological Processcellular response to iron ion starvation
GO:0055072Biological Processiron ion homeostasis
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    Send to blast
MLAMSSLFSS TFEFPLEDHL LSHDQHWQSV NDSLGNFAHK KLHSLDSFGS SSPLENYELN  60
NPSKRSSSTS RDPSSSKKLN HNASERDRRK KLNDLYSTLR SLLPRSDQKK KLSIPCSISQ  120
ALIYIPQLQN QVERLVQKKE EITSRTSNKQ NNVAYHPKKI KQHPLRQSHL PNVSVNAIDD  180
KEIVVQISTS KINESHHFSN ILQFLEKDEL QILNASTFAS CENKVFYTFH VQVKKTERME  240
SEMLSEKILS LC*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010653965.11e-57PREDICTED: transcription factor ORG2
TrEMBLD7TIN81e-57D7TIN8_VITVI; Putative uncharacterized protein
STRINGVIT_08s0007g05300.t013e-57(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.19e-46bHLH family protein